Category: Quick Start

When resources that you need for running your computing job are not available, you can still submit your resource allocation request so that your request will be put in the corresponding first-come, first-served queue (Slurm partition). And you can receive …

Receive Email Notifications of Your Slurm Jobs 🔒 Read More »

Note: This page will pull up-to-date information from the cluster. After start a Slurm session, if you run the following commands: source /opt/scripts/user/anaconda3-2023.03.init.sh conda env list You’ll see the following environments: After start a Slurm session, if you run the …

Python environments on the cluster 🔒 Read More »

Data transfer between your local computer and the cluster can be done using scp, rsync or FileZilla, etc. To connect to the cluster using FileZilla, the “Host” should be the cluster head node, and the “Port” should be 22.

“gpudebug” partition is for debugging GPU applications only. A “gpudebug” command is available for starting a Slurm session. The following command (email address is optional) will get you a Slurm session with 12 CPU cores, 12GB CPU memory and 1 …

Start a GPU Slurm session Read More »

Please be noted that SUMA (suma) won’t run when connecting to the cluster using X2Go, so we have to use ssh (Linux / MacOS users) or git bash (Windows users) to connect to the cluster if we need to run …

Run AFNI on Cluster Read More »

Windows users can connect to the cluster with GUI using Git Bash and VcXsrv X Server: Download and install VcXsrv Windows X Server Download and install Git (either Setup or Portable version works) Start VcXsrv with the default settings. After …

Connect to Cluster with GUI using Git Bash and VcXsrv Read More »

Linux and MacOS users can connect to the cluster using ssh command: For Linux users – open a terminal and then run the following command For MacOS users – open a terminal and then run the following command (use “-X” …

Connect to Cluster with GUI Using ssh Command Read More »

Once you sign into the UTSC Psychology research cluster using X2Go, you can follow the following instructions to start a GUI session by enabling X Forwarding (–x11). Open a terminal Run srun command to start a GUI session on the …

Start a GUI Interactive Session through X2Go Read More »

X2Go is a Remote Desktop solution for connecting to Linux servers. X2Go Client can be installed on Windows, MacOS or Linux systems. X2Go can keep your GUI sessions to the Linux servers alive if you don’t sign out even if …

Connecting to Cluster Using X2Go Read More »

Note:Cluster head node may change in the future, this example is using “neurocomp0.utsc.utoronto.ca”. Note:Click on the images to see details. 1: Open a terminal and connect to neurocomp0 using SSH without X forwarding (don’t use -X or -Y argument), and …

Connecting to Jupyter Notebook Running on PSY Cluster using Your Laptop/Desktop Browser 🔒 Read More »